吕池波, 郁二蒙, 谢 骏, 王广军, 余德光, 李志斐, 王海英, 龚望宝. 草鱼 Smad4 基因的克隆、生物信息学分析及反义真核载体的构建[J]. 华南农业大学学报, 2013, 34(4): 517-523. DOI: 10.7671/j.issn.1001-411X.2013.04.013
    引用本文: 吕池波, 郁二蒙, 谢 骏, 王广军, 余德光, 李志斐, 王海英, 龚望宝. 草鱼 Smad4 基因的克隆、生物信息学分析及反义真核载体的构建[J]. 华南农业大学学报, 2013, 34(4): 517-523. DOI: 10.7671/j.issn.1001-411X.2013.04.013
    LÜ Chibo, YU Ermeng, XIE Jun, WANG Guangjun, YU Deguang, LI Zhifei, WANG Haiying, GONG Wangbao. Cloning of Smad4,Bioinformatics Analysis and Construction of Antisense Smad4 Gene Expression Vector from Ctenopharyngodon idellus[J]. Journal of South China Agricultural University, 2013, 34(4): 517-523. DOI: 10.7671/j.issn.1001-411X.2013.04.013
    Citation: LÜ Chibo, YU Ermeng, XIE Jun, WANG Guangjun, YU Deguang, LI Zhifei, WANG Haiying, GONG Wangbao. Cloning of Smad4,Bioinformatics Analysis and Construction of Antisense Smad4 Gene Expression Vector from Ctenopharyngodon idellus[J]. Journal of South China Agricultural University, 2013, 34(4): 517-523. DOI: 10.7671/j.issn.1001-411X.2013.04.013

    草鱼 Smad4 基因的克隆、生物信息学分析及反义真核载体的构建

    Cloning of Smad4,Bioinformatics Analysis and Construction of Antisense Smad4 Gene Expression Vector from Ctenopharyngodon idellus

    • 摘要: 为了研究TGF-β信号传导中的关键蛋白Smad4在草鱼 Ctenopharyngodon idellus 发育过程中的作用,克隆出草鱼 Smad4 基因cDNA全序列,其碱基长度为2 974 bp,其中开放阅读框1 644 bp,编码547个氨基酸.生物信息学分析结果显示,草鱼Smad4蛋白相对分子质量为59 690.3,分子式为C2 632H4 073N753O791S24,理论等电点为6.5,含有MH1和MH2这2个高度保守的功能结构域.BLAST相似性分析显示,草鱼Smad4蛋白的氨基酸序列与鲤 Cyprinus carpio、斑马鱼Danio rerio的相似性较高,分别为94.23%和92.97%.还将草鱼 Smad4 基因的开放阅读框片段反向插入表达载体pcDNA3.1(+),成功构建了反义 Smad4 基因真核表达载体pcDNA3.1(+)-Anti-Smad4.

       

      Abstract: Smad4 is a key protein in TGF-β signal transduction, which can regulate the developmental processes like cell proliferation and differentiation. In order to study the role of Smad4 in developmental process of grass carp(Ctenopharyngodon idellus), a full length of 2 974 bp of Smad4 cDNA sequence from grass carp was obtained, a 1 644 bp CDS (coding sequence) encoding a polypeptide of 547 amino acids was determined in the Smad4 of grass carp. Bioinformatics analysis showed that the relative molecular mass of grass carp Smad4 protein was 59 690.3, the molecular formula was C2 632H4 073N753O791S24, isoelectric point was 6.5, and it contained both MH1 and MH2 highly conserved functional domains. BLAST homology analysis showed higher homology of grass carp Smad4 protein with common carp and zebrafish, which was 94.23% and 92.97% respectively. The open reading frame of grass carp Smad4 gene was reversely inserted into the expression vector pcDNA3.1(+), which constructed the antisense Smad4 gene eukaryotic expression vector pcDNA31(+)-Anti-Smad4.

       

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