Abstract:
Objective To clone the coding sequence of proL gene in the endophytic fungus Cytospora rhizophorae derived from Morinda officinalis, obtain ProL protein by heterologous expression and investigate its physicochemical properties, thereby providing a basis for the subsequent research on biological function of the ProL in the biosynthesis pathway of new bioactive compounds cytorhizins.
Method The proL gene from C. rhizophorae was amplified by PCR, the proL gene fragment was inserted into the prokaryotic expression vector of pET28a by the homologous recombination method and heterologously expressed in Escherichia coli. The ProL protein was renatured by refolding buffer containing urea with a gradiently decreased concentration, and SDS-PAGE analysis and mass spectrometry sequencing were used to verify the target ProL protein. The bioinformatic methods were employed to analyze the similarity of ProL protein with other related proteins, and predict the structure and function of ProL protein.
Result The coding sequence of proL gene was cloned, the open reading frame of proL gene is 909 bp in length, which encodes 303 amino acids, the molecular formula of ProL is C1495H2320N424O444S13, the relative molecular weight is 33 754.22, the total number of atoms is 4 696, PI is 5.69, so ProL is an acidic protein. ProL protein was abundantly expressed as inclusion bodies in E.coli, the recombinant ProL was obtained with a purity of 98.9%. Bioinformatics analysis results indicated that ProL protein had the highest amino acid sequence similarity (59.40%) with amidohydrolase 2 from Aspergillus ibericus XP025570169.1. The three-dimensional structure model of ProL protein is composed of eight α-helixes and eight β-folds. The conserved amino acid sequence is located at the position from 207 to 216.
Conclusions ProL protein belongs to the amidohydrolase superfamily, and is predicted as a novel protein. ProL protein might play a role of hydrolysis in the biosynthesis pathway of highly oxidized benzophenones.
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