团花重金属转运ATP酶家族鉴定及NcHMA2基因的功能分析

    Identification of the Neolamarckia cadamba heavy metal-transporting ATPase family and functional analysis of the NcHMA2 Gene

    • 摘要:
      目的 镉(Cd)是环境中广泛存在的有毒重金属污染物,低浓度也可危害植物生长发育,植物已进化出多种重金属胁迫防御机制。团花Neolamarckia cadamba是应用前景广阔的速生树种,具备植物修复潜力,但镉胁迫响应的分子调控机制尚不清晰,限制了它在重金属污染土壤修复上的应用,因此本研究筛选鉴定团花镉胁迫关键转运基因并解析其功能,阐明其耐镉机理,为其植物修复应用提供理论依据。
      方法 基于团花基因组数据,运用生物信息学方法对团花重金属转运ATP酶(Heavy metal-transporting ATPase,HMA)基因家族进行鉴定;利用转录组数据分析NcHMA基因在不同组织内和非生物胁迫下的表达模式,并通过RT-qPCR对其在镉胁迫下表达模式进行验证。
      结果 团花HMA基因家族有9个成员(NcHMA1-NcHMA9),并将其分为代表二价Zn/Co/Cd/Pb-ATP酶(Ⅰ组和Ⅱ组)和单价Cu/Ag-ATP酶(Ⅲ~Ⅴ组)。同一进化分支内的基因具有相似的保守基序模式和内含子−外显子结构。启动子顺式作用元件分析表明,NcHMA基因的表达受光响应、植物激素响应、非生物胁迫响应、植物发育和代谢等多个方面的调控。基于转录组的数据以及RT-qPCR结果表明,团花HMA基因家族基因主要在根中表达,受胁迫后根中的NcHMA2(evm.model.Contig39.142.1)、NcHMA5(evm.model.Contig264.111)以及NcHMA1(evm.model.Contig5.132)表达量均呈现下调趋势,而NcHMA8(evm.model.Contig264.110)NcHMA7(evm.model.Contig541.7)NcHMA4(evm.model.Contig396.34)表达量在前期小幅度上调,到了后期则显著上调。酵母异源表达试验表明,NcHMA2(evm.model.Contig39.142.1)具有镉转运活性。
      结论 团花中的NcHMA2(evm.model.Contig39.142.1) 基因在镉胁迫下显著诱导表达,表明其可能参与团花对镉胁迫的应答调控,此结果为其后续抗镉功能的深入解析提供了直接依据。

       

      Abstract:
      Objective Cadmium (Cd) is a toxic heavy metal pollutant widely present in the environment. Even at low concentrations, it can harm plant growth and development. Plants have evolved various defense mechanisms against heavy metal stress. Neolamarckia cadamba is a fast-growing tree species with broad application prospects and potential for phytoremediation; however, the molecular regulatory mechanisms underlying its response to cadmium stress remain unclear, limiting its application in the remediation of heavy metal-contaminated soils. Therefore, this study aimed to screen and identify key cadmium-stress-responsive transporter genes in Neolamarckia cadamba, elucidate their functions, clarify the mechanisms of cadmium tolerance, and provide a theoretical basis for its application in phytoremediation.
      Method Based on the Neolamarckia cadamba genomics data, bioinformatics methods were employed to identify the heavy metal-transporting ATPase (HMA) gene family in Neolamarckia cadamba. Transcriptome data were analyzed to examine the expression patterns of NcHMA genes across different tissues and under abiotic stresses, with RT-qPCR validation of their expression profiles under cadmium stress.
      Result The NcHMA gene family comprises nine members (NcHMA1-NcHMA9), classified into two groups representing divalent Zn/Co/Cd/Pb-ATPases (Groups I and II) and monovalent Cu/Ag-ATPases (Groups III-V). Genes within the same evolutionary branch exhibit similar conserved motif patterns and intron-exon structures. Analysis of promoter cis-acting elements revealed that NcHMA gene expression is regulated by multiple factors including light response, plant hormone response, abiotic stress response, plant development, and metabolism. Transcriptome data and RT-qPCR results revealed that NcHMA family genes were primarily expressed in roots. NcHMA2 (evm.model.Contig39.142.1), NcHMA5 (evm.model.Contig264.111), and NcHMA1 (evm.model.Contig5.132) exhibited a downward trend in expression levels. In contrast, NcHMA8 (evm.model.Contig264.110), NcHMA7 (evm.model.Contig541.7), and NcHMA4 (evm.model.Contig396.34) showed a slight upregulation in the early stage, followed by a significant increase in the late stage. Yeast heterologous expression experiments demonstrated that NcHMA2 (evm.model.Contig39.142.1) possesses cadmium transport function.
      Conclusion The NcHMA2 (evm.model.Contig39.142.1) gene in the Neolamarckia cadamba was significantly induced under cadmium stress, indicating its potential involvement in regulating the plant’s response to cadmium stress. This result provides direct evidence for the subsequent in-depth analysis of its cadmium resistance function.

       

    /

    返回文章
    返回